Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946081.1_cds_XP_016488358.1_78998
CDS Infomation

[gene=LOC107808363] [db_xref=GeneID:107808363] [protein=phospholipase A1-Igamma2, chloroplastic-like] [protein_id=XP_016488358.1] [location=join(13617..14881,16683..16911)] [gbkey=CDS]
Sequence

ATGATCATCTCCAATTCTAGGATCATATCTTTGTTCACAAATTTACAAAAACCAAACATA
ATGAAAAATCCTAGTCAAGCCACTATGTTCTTTTTCTCTGAGCCAGGAAAAAAAGTTACT
ACTAGAAATTACTCTCTCAAGGTTTTATCAAAGAATGATTCTTCCTTTCCTATATTATCC
GACATAAAGAAGAAGAAAAACAAAGTTTACGACGATGAAGAAGCAAAAATAGCAGAGAAA
TGGAAAGATATTCATGGTCAAAACGATTGGGAAGGGATGCTTGATCCTATCGATCCTCTA
TTACGAGCAGAGCTAATACGTTATGGTGAGATGGCACAAGCATGTTACGATGCATTCCAT
TTGGATCAAGATTCTAAGTTTTGTGGTAGCTGTAAAATTGATCCTGGATTATTTTTCCAG
AGTCTTGGATTGTCAGCAAATCATGGTTATAATGTAACCAGCTATATTTATTCCATGTAC
CATATTAATATACCAAGTTTTTTTAAAGTACCTCTTTGGCCTGATGCATGGAGTCATAAA
GCAAATTGGATTGGCTATGTAGCAGTTTCAAATGATGAATATTCGACACATTTAGGGCGT
CGTGACATAACAATTGCGTGGCGTGGCACAGTGACAGATCTTGAAAAGATAGCAGATTTC
ATGGATTTTCAAAAACCAACTAGATATCACAAGATTCCTAGTCGCGATCCAACCATAAAA
GTTGAAGCAGGATTCTTGGAAATCTACACCAGCAAAGACGACGAATGCAACTTTTGCAAG
GTCTCAGCAAGAGAACAGGTTTTAGCTGAAGTGAAGCGATTGATAGACAGATACTCGAAT
GAGGAAATAAGTATAACAATAACAGGACATAGTTTGGGAAGTGCTTTAGCTACAATAAAT
GCTTATGATATTGCAGAGATTGGACTAGATGTACGCGAAGATGGTCGCGTTATACCTATA
TGTGTCTTCTCATTCTCAGGGCCAAGAGTTGGGAACATTAGATTTAAGCAAAGGCTTGAG
GGATTAGGAGTGAAGGTGTTAAGAGTAGTAAATAAACATGACAAAGTTCCAGCAGTTCCT
GGGATTTTTCTAAATGAGAATGTTCCTACATTTGTTCAAAAAGTTGGTGAATTGTTCTTA
CCTTGGTGTTATTTGCATGTTGGAGAAGAGCTTGTTTTGGATCACAAGACTTCCCCTTTC
TTGAAAGATATAGATAATCTCACATACTTCCACAATTTGGAGGTTCACCTGCATTTACTC
GACGGATTTCATGGGGAAGGAAGAAGCATTTGGCATGGGAGCAGCAGGGAAAAAGCTTTG
GTGAATAAAACAACAGACTTTTTAAAAGATGATTTCTCTGTTCCACCAAATTGGTGGGAA
ACAGAATACAGAAAGCTAATTGAGCAGCACAAAGGACAGTGGATGATCGATCATCAACAG
AGTAGTCTCAAGAATCATTCCCCTGAAGAAGATGATCAAAACCATCACCTTTAG

Peptide Sequence

PEP ID

XP_016488358.1
PEP Infomation

PREDICTED: phospholipase A1-Igamma2, chloroplastic-like [Nicotiana tabacum]
Sequence

MIISNSRIISLFTNLQKPNIMKNPSQATMFFFSEPGKKVTTRNYSLKVLSKNDSSFPILS
DIKKKKNKVYDDEEAKIAEKWKDIHGQNDWEGMLDPIDPLLRAELIRYGEMAQACYDAFH
LDQDSKFCGSCKIDPGLFFQSLGLSANHGYNVTSYIYSMYHINIPSFFKVPLWPDAWSHK
ANWIGYVAVSNDEYSTHLGRRDITIAWRGTVTDLEKIADFMDFQKPTRYHKIPSRDPTIK
VEAGFLEIYTSKDDECNFCKVSAREQVLAEVKRLIDRYSNEEISITITGHSLGSALATIN
AYDIAEIGLDVREDGRVIPICVFSFSGPRVGNIRFKQRLEGLGVKVLRVVNKHDKVPAVP
GIFLNENVPTFVQKVGELFLPWCYLHVGEELVLDHKTSPFLKDIDNLTYFHNLEVHLHLL
DGFHGEGRSIWHGSSREKALVNKTTDFLKDDFSVPPNWWETEYRKLIEQHKGQWMIDHQQ
SSLKNHSPEEDDQNHHL

Transcript Sequence

Gene sequence data has not been registered.